After recovering the node, some channels are still being closed

We could possibly make this clearer for users, as I believe if you start up a new LND instance with the same key while the old one is still live, LND rules will attempt to close your channels. There are other causes too, for the moment we generally recommend closing channels before migrating servers. Reference: Migrating LND - Builder's Guide

If you are unable to contact the other nodes, you will likely need to use Chantools as per the below.

Please give me a moment, and I will try to write this up into a concise guide.